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Class: MaterialEntity

An entity that consists of matter. Has an identity that persists over time.

URI: beril_model:MaterialEntity

classDiagram class MaterialEntity NamedThing <|-- MaterialEntity MaterialEntity <|-- SoilSample MaterialEntity <|-- DnaExtract MaterialEntity : color MaterialEntity --|> ColorEnum : color MaterialEntity : description MaterialEntity : id MaterialEntity : mass_g MaterialEntity : name

Inheritance

Slots

Name Cardinality and Range Description Inheritance
mass_g 0..1
Float		 direct
color 0..1
ColorEnum		 direct
id 1..1
Uriorcurie		 A unique identifier for a thing NamedThing
name 0..1
String		 A human-readable name for a thing NamedThing
description 0..1
String		 A human-readable description for a thing NamedThing

Usages

used by used in type used
NamedThingCollection material_entities range MaterialEntity
Process inputs range MaterialEntity
Process outputs range MaterialEntity
Splitting inputs range MaterialEntity
Splitting outputs range MaterialEntity
Pooling inputs range MaterialEntity
Pooling outputs range MaterialEntity

Aliases

  • Material
  • Physical entity

Comments

  • bootstrapped from https://github.com/microbiomedata/nmdc-schema/pull/710

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/beril-model/beril-model

Mappings

Mapping Type Mapped Value
self beril_model:MaterialEntity
native beril_model:MaterialEntity
exact BFO:0000040

LinkML Source

Direct

name: MaterialEntity
description: An entity that consists of matter. Has an identity that persists over
  time.
comments:
- bootstrapped from https://github.com/microbiomedata/nmdc-schema/pull/710
from_schema: https://w3id.org/beril-model/beril-model
aliases:
- Material
- Physical entity
exact_mappings:
- BFO:0000040
rank: 1000
is_a: NamedThing
slots:
- mass_g
- color
disjoint_with:
- InformationArtifact
- Process
- Observation

Induced

name: MaterialEntity
description: An entity that consists of matter. Has an identity that persists over
  time.
comments:
- bootstrapped from https://github.com/microbiomedata/nmdc-schema/pull/710
from_schema: https://w3id.org/beril-model/beril-model
aliases:
- Material
- Physical entity
exact_mappings:
- BFO:0000040
rank: 1000
is_a: NamedThing
attributes:
  mass_g:
    name: mass_g
    from_schema: https://w3id.org/beril-model/beril-model
    rank: 101
    alias: mass_g
    owner: MaterialEntity
    domain_of:
    - MaterialEntity
    slot_group: sample_attributes
    range: float
  color:
    name: color
    from_schema: https://w3id.org/beril-model/beril-model
    rank: 102
    alias: color
    owner: MaterialEntity
    domain_of:
    - MaterialEntity
    slot_group: sample_attributes
    range: ColorEnum
  id:
    name: id
    description: A unique identifier for a thing
    from_schema: https://w3id.org/beril-model/beril-model
    rank: 1
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: MaterialEntity
    domain_of:
    - NamedThing
    - Person
    slot_group: identifiers
    range: uriorcurie
    required: true
    pattern: '[a-zA-Z0-9_]+:[a-zA-Z0-9_]+'
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://w3id.org/beril-model/beril-model
    rank: 2
    slot_uri: schema:name
    alias: name
    owner: MaterialEntity
    domain_of:
    - NamedThing
    slot_group: identifiers
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://w3id.org/beril-model/beril-model
    rank: 3
    slot_uri: schema:description
    alias: description
    owner: MaterialEntity
    domain_of:
    - NamedThing
    slot_group: identifiers
    range: string
disjoint_with:
- InformationArtifact
- Process
- Observation